Anna Blumental-Perry
- Theodore L. Mathuram, Yafei Su, Jonathan E. Bard, Noa A. Perry, Chien Wen Chen, Marisa T. Warren, Phillip A. Linden, Yaron Perry, Maria Hatzoglou, Yun Wu, Anna Blumental-Perry. (2024) Mitochondrial ncRNA LDL-805 declines in alveolar epithelial type 2 cells of chronic obstructive pulmonary disease patients. preprint 10.1101/2024.01.14.575591 has posted on bioRxiv (Jan)
- Zhi-wei Ye, Jie Zhang, Muhammad Aslam, Anna Blumental-Perry, Kenneth D. Tew, Danyelle M. Townsend. (2023) Chapter Four - Protein disulfide isomerase family mediated redox regulation in cancer. In: Protein disulfide isomerase family mediated redox regulation in cancer, Advances in Cancer Research, Invited. Contributed to writing and editing. July, 2023. https://doi.org/10.1016/bs.acr.2023.06.001. ELSEVIER
- Mathuram TL, Townsend DM, Lynch VJ, Bederman I, Ye ZW, Zhang J, Sigurdson WJ, Prendergast E, Jobava R, Ferruzza JP, D'Angelo MR, Hatzoglou M, Perry Y, Blumental-Perry A. (2022) A Synthetic Small RNA Homologous to the D-Loop Transcript of mtDNA Enhances Mitochondrial Bioenergetics. Frontiers in physiology (Jan), 13: 772313. doi:10.3389/fphys.2022.772313
Michael Buck, PhD
- Maley SJ, Yue Y, Burns KF, Hovey KM, Wactawski-Wende J, Freudenheim JL, McSkimming DI, LaMonte MJ, Andrews CA, Sun Y, Buck M, Millen AE. (2023) Alcohol Consumption and the Diversity of the Oral Microbiome in Postmenopausal Women. The Journal of nutrition (Oct).
- Oyelakin A, Sosa J, Nayak KB, Glathar A, Gluck C, Sethi I, Tsompana M, Nowak N, Buck M, Romano RA, Sinha S. (2023) An integrated genomic approach identifies follistatin as a target of the p63-epidermal growth factor receptor oncogenic network in head and neck squamous cell carcinoma. NAR cancer (Sep), 5(3): zcad038. doi:10.1093/narcan/zcad038
- Ramalingam V, Yu X, Slaughter BD, Unruh JR, Brennan KJ, Onyshchenko A, Lange JJ, Natarajan M, Buck M, Zeitlinger J. (2023) Lola-I is a promoter pioneer factor that establishes de novo Pol II pausing during development. Nature communications (Sep), 14(1): 5862. doi:10.1038/s41467-023-41408-1
Rebekah Charney, PhD
- Charney RM, Prasad MS, Juan-Sing C, Patel LJ, Hernandez JC, Wu J, García-Castro MI. (2023) Mowat-Wilson syndrome factor ZEB2 controls early formation of human neural crest through BMP signaling modulation. Stem cell reports (Nov), 18(11): 2254-2267.
- Jansen C, Paraiso KD, Zhou JJ, Blitz IL, Fish MB, Charney RM, Cho JS, Yasuoka Y, Sudou N, Bright AR, Wlizla M, Veenstra GJC, Taira M, Zorn AM, Mortazavi A, Cho KWY. (2022) Uncovering the mesendoderm gene regulatory network through multi-omic data integration. Cell reports (Feb), 38(7): 110364. doi:10.1016/j.celrep.2022.110364
Dahong Chen
- Li Q, Chen D, Wang S. (2023) Character displacement of egg colors during tinamou speciation. Evolution; international journal of organic evolution (Jul), 77(8): 1874-1881.
- Rosin LF, Chen D, Chen Y, Lei EP. (2022) Dosage compensation in Bombyx mori is achieved by partial repression of both Z chromosomes in males. Proceedings of the National Academy of Sciences of the United States of America (Mar), 119(10): e2113374119. doi:10.1073/pnas.2113374119
- Chen D, McManus CE, Radmanesh B, Matzat LH, Lei EP. (2021) Temporal inhibition of chromatin looping and enhancer accessibility during neuronal remodeling. Nature communications (Nov), 12(1): 6366. doi:10.1038/s41467-021-26628-7
D. Fernando Estrada, PhD
Lee Ann Garrett-Sinha, PhD
- Kim N, Ju IG, Jeon SH, Lee Y, Jung MJ, Gee MS, Cho JS, Inn KS, Garrett-Sinha LA, Oh MS, Lee JK. (2023) Inhibition of microfold cells ameliorates early pathological phenotypes by modulating microglial functions in Alzheimer's disease mouse model. Journal of neuroinflammation (Nov), 20(1): 282. doi:10.1186/s12974-023-02966-9
- Battaglia M, Garrett-Sinha LA. (2023) Staphylococcus xylosus and Staphylococcus aureus as commensals and pathogens on murine skin. Laboratory animal research (Aug), 39(1): 18. doi:10.1186/s42826-023-00169-0
- Garrett-Sinha LA. (2023) An update on the roles of transcription factor Ets1 in autoimmune diseases. WIREs mechanisms of disease (Jan), 15(6): e1627.
Marc Halfon, PhD
- Reid, W., Sterling-Letnsch, G. and Halfon, M.S. (2023) Protocol for fixing and peeling Aedes aegypti embryos. protocols.io (Dec) doi:10.17504/protocols.io.261ged88wv47/v1
- Dyer NA, Lucas ER, Nagi SC, McDermott D, Brenas JH, Miles A, Clarkson CS, Mawejje HD, Wilding CS, Halfon MS, Asma H, Heinz E, Donnelly MJ. (2023) Mechanisms of transcriptional regulation in Anopheles gambiae revealed by allele specific expression. bioRxiv : the preprint server for biology (Nov). doi:10.1101/2023.11.22.568226
- Schember, I. , Reid, W. and Halfon, M.S. (2023) Conserved and novel enhancers regulate expression of Aedes aegypti single-minded in the embryonic ventral midline. BioRXiv (Aug) doi:10.1101/2023.08.01.551414.
Daniel Kosman, PhD
- Singha A, Sekretareva A, Tao L, Lim H, Ha Y, Braun A, Jones SM, Hedman B, Hodgson KO, Britt RD, Kosman DJ, Solomon EI. (2023) Tuning the Type 1 Reduction Potential of Multicopper Oxidases: Uncoupling the Effects of Electrostatics and H-Bonding to Histidine Ligands. Journal of the American Chemical Society (Jun), 145(24): 13284-13301. doi:10.1021/jacs.3c03241
- Smith FM, Kosman DJ. (2023) Loss of filamentous actin, tight junction protein expression, and paracellular barrier integrity in frataxin-deficient human brain microvascular endothelial cells-implications for blood-brain barrier physiology in Friedreich's ataxia. Frontiers in molecular biosciences (Jan), 10: 1299201. doi:10.3389/fmolb.2023.1299201
- Steimle BL, Bailey DK, Smith FM, Rosenblum SL, Kosman DJ. (2022) Calcium and the Ca-ATPase SPCA1 modulate plasma membrane abundance of ZIP8 and ZIP14 to regulate Mn(II) uptake in brain microvascular endothelial cells. The Journal of biological chemistry (Aug), 298(8): 102211. doi:10.1016/j.jbc.2022.102211
Techung Lee, PhD
- Camila Sabatini, Richard Hall, Techung Lee. (2024) Novel Odontogenic Potential of Secreted Frizzled-Related Protein 2 (sFRP2). American Association for Dental, Oral, and Craniofacial Research. New Orleans, Louisiana (Mar)Poster
- Camila Sabatini, Richard Hall, Techung Lee. (2023) Human Aging and the Regenerative Potential of Dental Pulp Stem Cells (DPSCs). JSMBS Aging Symposium. Buffalo, New York (Dec)Poster
Andrew Lombardo, Ph.D.
- Miller MR, McDermitt DJ, Sauvanet C, Lombardo AT, Zaman R, Bretscher A. (2022) The RabGAPs EPI64A and EPI64B regulate the apical structure of epithelial cells †. Molecular biology of the cell (Jan), 33(1): ar8. doi:10.1091/mbc.E21-05-0268
- Zaman R, Lombardo A, Sauvanet C, Viswanatha R, Awad V, Bonomo LE, McDermitt D, Bretscher A. (2021) Effector-mediated ERM activation locally inhibits RhoA activity to shape the apical cell domain. The Journal of cell biology (Jun), 220(6). doi:10.1083/jcb.202007146
Norma Nowak, PhD
- Jonathan E Bard*1,2, Na Jiang3*, Jamaal Emerson1, Madeleine Bartz2, Natalie A. Lamb4, Brandon J. Marzullo2, Alyssa Pohlman2, Amanda Boccolucci2, Norma J. Nowak1,2, Donald A. Yergeau2, Andrew T. Crooks3, Jennifer A. Surtees1#. (2023) Genomic Profiling and Spatial SEIR Modeling of COVID-19 Transmission in Western New York. (Dec)
- Oyelakin A, Sosa J, Nayak KB, Glathar A, Gluck C, Sethi I, Tsompana M, Nowak N, Buck M, Romano RA, Sinha S. NAR Cancer. 2023 Jul 24;5(3):zcad038. doi: 10.1093/narcan/zcad038. PMID: 37492374; PMCID: PMC10365026. (2023) An integrated genomic approach identifies follistatin as a target of the p63-epidermal growth factor receptor oncogenic network in head and neck squamous cell carcinoma. Nucleic Acids Research Cancer (Sep), 5(3) doi:10.1093/narcan/zcad038
- Segelhurst E, Bard J, Pillsbury A, Mahbubul Md, Lamb N, Zhu C, Pohlman A, Boccolucci A, Emerson J , Marzullo B, Yergeau D, Nowak N, Bradley I, Surtees J, Ye Y. (2023) Robust performance of SARS-CoV-2 Whole-Genome Sequencing from Wastewater with a Nonselective Virus Concentration Method. ACS ES &T Water (Feb) doi:https://doi.org/10.1021/acsestwater.2c00456
Mark O‘Brian, PhD
Yungki Park, PhD
- Fan C, An H, Kim D, Park Y. (2023) Uncovering oligodendrocyte enhancers that control Cnp expression. Human Molecular Genetics (Nov)(32): 3225-3236.
- Fan C, Kim D, An H, Park Y. (2023) Identifying an oligodendrocyte enhancer that regulates Olig2 expression. Human Molecular Genetics (Feb)(32): 835-846.
- Kim D, An H, Fan C, Park Y. (2021) Identifying oligodendrocyte enhancers governing Plp1 expression. Human Molecular Genetics (Jul), 30(23): 2225-2239. doi:10.1093/hmg/ddab184
Mulchand Patel, PhD
- Rideout, T.C., Andreani, G. A., Pembroke, J., Choudhary, D., Browne, R. W., Mahmood, S. and Patel, M. S. (2023) Maternal pea protein intake provides sex-specific protection against dyslipidemia in offspring from obese pregnancies. Nutrients (Feb), 15: 867. doi:doi.org/10.3390/nu15040867
- Patel, M. S. and Harris, R. A. (2023) Metabolic regulation. In: Bradshaw, R. A., Hart, G. W. and Stahl, P. D. (eds) Encyclopedia of Cell Biology, Second Edition. Vol 1, 2023, pp. 353-365. http://dx.doi.org/10.1016/B978-0-12-821618-7.00147-4
- Rideout TC, Andreani GA, Pembroke J, Choudhary D, Browne RW, Mahmood S, Patel MS. (2023) Maternal Pea Protein Intake Provides Sex-Specific Protection against Dyslipidemia in Offspring from Obese Pregnancies. Nutrients (Feb), 15(4). doi:10.3390/nu15040867
Gabriela Popescu, PhD
- Iacobucci GJ, Popescu GK. (2023) Calcium- and calmodulin-dependent inhibition of NMDA receptor currents. Biophysical journal (Dec), 123(3): 277-293. doi:10.1016/j.bpj.2023.12.018
- Abbott, H. Wen, Liu, B, Gupta, S, Iacobucci, GJ, Zheng, W and Popescu, GK. (2023) Allosteric Site Mediates Inhibition of Tonic NMDA Receptor Activity by Low Dose Ketamine,. Research Square (Aug) doi:10.21203/rs.3.rs-3304783/v1
- Kumar J, Popescu GK, Gantz SC. (2023) GluD receptors are functional ion channels. Biophysical journal (Jun), 122(12): 2383-2395. doi:10.1016/j.bpj.2023.05.012
Christine Schaner Tooley, PhD
Satrajit Sinha, PhD
- ?Np63 regulates MDSC survival and metabolism in triple negative breast cancer. Ukjin Kim; Rahul Debnath; Javier E Maiz; Joshua Rico; Satrajit Sinha; Mario Andres Blanco; Rumela Chakrabarti. iScience in press. (2023) (Dec)
- Architecture of HNSCC Tumor Microenvironment Revealed: Can Tertiary Lymphoid Structures Predict Post-Surgery Recurrence? Jennifer Sosa, Alexandra Glathar, Satrajit Sinha. Translation and Clinical Research in press. (2023) (Dec)
- Battaglia M, Sunshine AC, Luo W, Jin R, Stith A, Lindemann M, Miller LS, Sinha S, Wohlfert E, Garrett-Sinha LA. Ets1 and IL17RA cooperate to regulate autoimmune responses and skin immunity to Staphylococcus aureus. Front Immunol. 2023;14:1208200. doi: 10.3389/fimmu.2023.1208200. eCollection 2023. PubMed PMID: 37691956; PubMed Central PMCID: PMC10486983. (2023) (Sep)
Jennifer Surtees, PhD
- Bard JE*, Jiang N*, Emerson JG, Bartz M, Lamb NA, Marzullo BJ, Pohlman A, Boccolucci A, Nowak NJ, Yergeau D, Crooks AT, Surtees JA#. (2023) Genomic Profiling and Spatial SEIR Modeling of COVID-19 Transmission in Western New York.
- Medina-Rivera M, Phelps S, Sridharan M, Becker J, Lamb NA, Kumar C, Sutton MD, Bielinsky A, Balakrishnan L, Surtees JA. (2023) Elevated MSH2 MSH3 expression interferes with DNA metabolism in vivo. Nucleic acids research (Dec), 51(22): 12185-12206. doi:10.1093/nar/gkad934
- Segelhurst E, Bard JE, Pillsbury AN, Alam MM, Lamb NA, Zhu C, Pohlman A, Boccolucci A, Emerson J, Marzullo BJ, Yergeau DA, Nowak NJ, Bradley IM, Surtees JA, Ye Y. (2023) Robust Performance of SARS-CoV-2 Whole-Genome Sequencing from Wastewater with a Nonselective Virus Concentration Method. ACS ES&T water (Apr), 3(4): 954-962. doi:10.1021/acsestwater.2c00456
Mark Sutton, PhD
- Medina-Rivera M, Phelps S, Sridharan M, Becker J, Lamb NA, Kumar C, Sutton MD, Bielinsky A, Balakrishnan L, Surtees JA. (2023) Elevated MSH2 MSH3 expression interferes with DNA metabolism in vivo. Nucleic acids research (Dec), 51(22): 12185-12206. doi:10.1093/nar/gkad934
- Scotland MK, Homiski C, Sutton MD. (2022) During Translesion Synthesis, Escherichia coli DinB89 (T120P) Alters Interactions of DinB (Pol IV) with Pol III Subunit Assemblies and SSB, but Not with the ß Clamp. Journal of bacteriology (Mar)e0061121.
- Homiski C, Scotland MK, Babu VMP, Chodavarapu S, Maul RW, Kaguni JM, Sutton MD. (2021) The mutant ßE202K sliding clamp protein impairs DNA polymerase III replication activity. Journal of bacteriology (Sep)JB0030321.
Mary Taub, Ph.D.
- M. Taub. (2023) Oncometabolite L-2-Hydroxyglutarate Promotes Oncogenesis of Renal Cell Carcinomas by Down-regulating Differentiation. In: Oncometabolite L-2-Hydroxyglutarate Promotes Oncogenesis of Renal Cell Carcinomas by Down-regulating Differentiation. Intech Open, pp 45-65.
- R. Thiyagarajan, and M. Taub. (2023) Studies with Human-Induced Pluripotent Stem Cells Reveal that CTNS Mutations Can Alter Renal Proximal Tubule Differentiation. International Journal of Molecular Sciences (Nov), 24: 17004. 23 pages. doi:doi.org/10.3390/ijms242317004
- Taub M, Mahmoudzadeh NH, Tennessen JM, Sudarshan S. (2022) Renal oncometabolite L-2-hydroxyglutarate imposes a block in kidney tubulogenesis: Evidence for an epigenetic basis for the L-2HG-induced impairment of differentiation. Frontiers in endocrinology (Jan), 13: 932286. doi:10.3389/fendo.2022.932286