Recent Faculty Publications

We share our research studies with physicians and scientists worldwide through publications in leading academic journals. View a listing of our faculty’s most recent publications.

Yongho Bae, PhD

Krajnik A, Brazzo JA, Vaidyanathan K, Das T, Redondo-MuÃ±oz J, Bae Y. Phosphoinositide Signaling and Mechanotransduction in Cardiovascular Biology and Disease. Front Cell Dev Biol. 2020; 8
Brazzo III JA, Lee K, Bae Y. Mechanosensitive Expression of Lamellipodin Governs Cell Cycle Progression and Intracellular Stiffness. bioRxiv. 2020
Vaidyanathan K, Wang C, Krajnik A, Yu Y, Choi M, Lin B, Heo SJ, Kolega J, Lee K, Bae Y. Machine learning reveals heterogeneous responses to FAK, Rac, Rho, and Cdc42 inhibition on vascular smooth muscle cell spheroid formation and morphology. bioRxiv. 2020

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Scott Doyle, PhD

Whitney J, Corredor G, Janowczyk A, Ganesan S, Doyle ST, Tomaszewski J, Feldman M, Gilmore H, Madabhushi A. Quantitative nuclear histomorphometry predicts oncotype DX risk categories for early stage ER+ breast cancer. BMC Cancer. 2018; 18(1)
Folmsbee J, Doyle ST. Active Deep Learning: Improved Training Efficiency of Convolutional Neural Networks for Tissue Classification in Oral Cavity Cancer. 2018 15th IEEE International Symposium on Biomedical Imaging. 2018
Lewis S, Folmsbee J, Inglis SD, Doyle ST. Building a Hybrid Gross Anatomy Curriculum: Integration of Virtual & Cadaveric Models. The FASEB Journal. 2018; 32(1)

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David Freedman, PhD

DA Freedman, N Nivedm B Decker, S Narla, S Shafik, S Manohar, R Salvi, MK Stachowiak, EK Stachowiak. Neurogenesis and Oligodendrogenesis in a Mouse Model of Blast-Induced Traumatic Brain Injury. Neurology and Neurobiology. 2020; 3(3)
CA Benson, HR Powell, M Liput, S Dinham, DA Freedman, TA Ignatowski, EK Stachowiak, MK Stachowiak. Immune Factor, TNFα, Disrupts Human Brain Organoid Development Similar to Schizophrenia—Schizophrenia Increases Developmental Vulnerability to TNFα. Frontiers in Cellular Neuroscience. 2020; 14(233)

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Tracey Ignatowski, PhD

Benson CA, Powell HR, Liput M, Dinham S, Freedman DA, Ignatowski TA, Stachowiak EK, Stachowiak MK. Immune Factor, TNFÎ±, Disrupts Human Brain Organoid Development Similar to Schizophrenia-Schizophrenia Increases Developmental Vulnerability to TNFÎ±. Front Cell Neurosci. 2020; 14
LaMacchia ZM, Spengler RN, Jaffari M, Abidi AH, Ahmed T, Singh N, Tobinick EL, Ignatowski TA. Perispinal injection of a TNF blocker directed to the brain of rats alleviates the sensory and affective components of chronic constriction injury-induced neuropathic pain. Brain Behav Immun. 2019
Ignatowski TA, Spengler RN. Prescribe exercise to treat infections. Brain Behav Immun. 2019; 77

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Thaer Khoury, MD

Benefield HC, Zirpoli GR, Allott EH, Shan Y, Hurson AN, Omilian AR, Khoury T, Hong CC, Olshan AF, Bethea TN, Bandera EV, Palmer JR, Ambrosone CB, Troester MA. Epidemiology of Basal-like and Luminal Breast Cancers among Black Women in the AMBER Consortium. Cancer Epidemiol Biomarkers Prev. 2020
Cheng TD, Omilian AR, Yao S, Sanchez PV, Polk LZ, Zhang W, Datta S, Bshara W, Ondracek RP, Davis W, Liu S, Hong CC, Bandera EV, Khoury T, Ambrosone CB. Body fatness and mTOR pathway activation of breast cancer in the Women's Circle of Health Study. NPJ Breast Cancer. 2020; 6
Omilian AR, Wei L, Hong CC, Bandera EV, Liu S, Khoury T, Ambrosone CB, Yao S. Somatic mutations of triple-negative breast cancer: a comparison between Black and White women. Breast Cancer Res Treat. 2020; 182(2)

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John Kolega, PhD

Tutino VM, Poppenberg KE, Li L, Shallwani H, Jiang K, Jarvis JN, Sun Y, Snyder KV, Levy EI, Siddiqui AH, Kolega J, Meng H. Biomarkers from circulating neutrophil transcriptomes have potential to detect unruptured intracranial aneurysms. J Transl Med. 2018; 16(1)

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Colin Moore, PhD

Moore CW, Fanous J, Rice CL. Fiber type composition of contiguous palmaris longus and abductor pollicis brevis muscles: Morphological evidence of a functional synergy. J Anat. 2021; 238(1)

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Olga Pletnikova, MD

Jabbari E, Koga S, Valentino RR, Reynolds RH, Ferrari R, Tan MMX, Rowe JB, Dalgard CL, Scholz SW, Dickson DW, Warner TT, Revesz T, Höglinger GU, Ross OA, Ryten M, Hardy J, Shoai M, Morris HR; PSP Genetics Group.. Genetic determinants of survival in progressive supranuclear palsy: a genome-wide association study Lancet Neurology. 2021; 20(2)
Dewan R, Chia R, Ding J, Hickman RA, Stein TD, Abramzon Y, Ahmed S, Sabir MS, Portley MK, Tucci A, Ibáñez K, Shankaracharya FNU, Keagle P, Rossi G, Caroppo P, Tagliavini F, Waldo ML, Johansson PM, Nilsson CF; American Genome Center (TAGC); FALS Sequencing. Pathogenic Huntingtin Repeat Expansions in Patients with Frontotemporal Dementia and Amyotrophic Lateral Sclerosis Neuron. 2021; 109(3)
Chia R, Sabir MS, Bandres-Ciga S, Saez-Atienzar S, Reynolds RH, Gustavsson E, Walton RL, Ahmed S, Viollet C, Ding J, Makarious MB, Diez-Fairen M, Portley MK, Shah Z, Abramzon Y, Hernandez DG, Blauwendraat C, Stone DJ, Eicher J, Parkkinen L, Ansorge O, Cla. Genome sequencing analysis identifies new loci associated with Lewy body dementia and provides insights into its genetic architecture. Nat Genet. 2021

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Pinaki Sarder, PhD

Lutnick B, Ginley B, Govind D, McGarry SD, LaViolette PS, Yacoub R, Jain S, Tomaszewski JE, Jen KY, Sarder P. An Integrated Iterative Annotation Technique for Easing Neural Network Training in Medical Image Analysis. Nat Mach Intell. 2019; 1(2)
Majumdar A, Jen KY, Jain S, Tomaszewski JE, Sarder P. Examining Structural Patterns and Causality in Diabetic Nephropathy using inter-Glomerular Distance and Bayesian Graphical Models. Proc SPIE Int Soc Opt Eng. 2019; 10956
Maji D, Lu J, Sarder P, Schmieder AH, Cui G, Yang X, Pan D, Lew MD, Achilefu S, Lanza GM. Cellular Trafficking of Sn-2 Phosphatidylcholine Prodrugs Studied with Fluorescence Lifetime Imaging and Super-resolution Microscopy. Precis Nanomed. 2018; 1(2)

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Recent Faculty Publications

Yongho Bae, PhD

Scott Doyle, PhD

David Freedman, PhD

Tracey Ignatowski, PhD

Thaer Khoury, MD

John Kolega, PhD

Colin Moore, PhD

Olga Pletnikova, MD

Pinaki Sarder, PhD

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