We share our research studies with physicians and scientists worldwide through publications in leading academic journals. View a listing of our faculty’s most recent publications.
Yongho Bae, PhD
- Li H, Shyam Sunder S, Jatwani K, Bae Y, Deng L, Liu Q, Dy GK, Pokharel S. (2024) Tumor Characteristics and Treatment Responsiveness in Pembrolizumab-Treated Non-Small Cell Lung Carcinoma. Cancers (Feb), 16(4) doi:10.3390/cancers16040744
- Ricci MMC, Orenberg A, Ohayon L, Gau D, Wills RC, Bae Y, Das T, Koes D, Hammond GRV, Roy P. (2024) Actin-binding protein profilin1 is an important determinant of cellular phosphoinositide control. The Journal of biological chemistry (Jan), 300(1): 105583. doi:10.1016/j.jbc.2023.105583
- Tumenbayar BI, Tutino VM, Brazzo JA, Yao P, Bae Y. (2024) FAK and p130Cas modulate stiffness-mediated early transcription and cellular metabolism. bioRxiv : the preprint server for biology (Jan) doi:10.1101/2024.01.15.575789
Lucia Balos, MD
Christopher Cohan, PhD
Scott Doyle, PhD
- Kapustin DA, Yun J, Su V, Rubin SJ, Modica I, Chung D, Fan J, Khan MN, Chai RL, Karasick M, Doyle S, Brandwein-Weber M, Urken ML. (2024) Frozen Section Timeout: Pilot Study to Reconcile Margins Using 3D Resected Specimen and Defect Scans. The Laryngoscope (Feb), 134(2): 725-731.
- Finkelstein S, Timmaraju VA, Samankan S, O'Malley Q, Kapustin D, Spaulding S, Xing M, Matloob A, Beute J, Seo G, Saturno M, Greenberg L, Wein L, Gonzalez-Velazquez C, Doyle S, Levine J, Urken M, Brandwein-Weber M. (2023) Functional loss of tumor suppressor genes detected by loss of heterozygosity, but not driver mutations, predicts aggressive lymph node status in papillary thyroid carcinoma. Pathology, research and practice (Nov), 251: 154842.
- Kapustin D, Su V, Yun J, Rubin SJ, Chung D, Modica I, Khan MN, Chai RL, Karasick M, Doyle S, Brandwein-Weber M, Urken ML. (2023) iPad Annotation of 3D Surgical Models Using Procreate®: Novel Documentation of Supplemental Margins. The Laryngoscope (Nov).
Tracey Ignatowski, PhD
- Tobinick E, Spengler R, Ignatowski T. (2023) New evidence of the role of brain immune mechanisms in long COVID. https://brainimmune.com/brain-immune-mechanisms-long-covid/
- (2022) Immune Cells Imitating Neurons Cause Pain in Mice with Tumors. The Scientist (Oct)
- Qayum S, Schmitt RR, Mojdeganlou H, Ignatowski TA, Bass C, Muthaiah VPK, Mahajan S. (2022) A Cannabidiol (CBD) Nanoformulation to Treat Neuropathic Pain. Buffalo Society for Neuroscience Chapter 15th Annual Neuroscience Research Day, University at Buffalo. Buffalo, New York (Oct)Poster
Rafal Kozielski, MD
- Fennell J, Territo HM, Telt N, Wrotniak BH, Kozielski R, Pape E, Penque M. (2023) The Association Between C-Reactive Protein Levels and Pediatric Appendicitis Score and the Severity of Appendicitis in Children. The Journal of emergency medicine (Dec).
- Craig E, Wiltsie LM, Beaupin LK, Baig A, Kozielski R, Rothstein DH, Li V, Twist CJ, Barth M. (2021) Anaplastic lymphoma kinase inhibitor therapy in the treatment of inflammatory myofibroblastic tumors in pediatric patients: Case reports and literature review. Journal of pediatric surgery (Dec), 56(12): 2364-2371.
- Hagoel TJ, Cortez Gomez E, Gupta A, Twist CJ, Kozielski R, Martin JC, Gao L, Kuechle J, Singh PK, Lynch M, Wei L, Liu S, Wang J, Ohm JE. (2021) CLINICOPATHOLOGIC AND MOLECULAR ANALYSIS OF A SINGLE BCOR-CCNB3+ UNDIFFERENTIATED SARCOMA OF THE KIDNEY CONFERS SIGNIFICANT EPIGENETIC ALTERATIONS. Cold Spring Harbor molecular case studies (Nov).
Lin Liu, MD, PhD
- Bei Yang, MD, PhD;1 Romesh Kohli, MD;2 John E Tomaszewski, MD;1 Lin Liu, MD, PhD1*. (2022) Scedosporiosis Transmission from Near-Drowning Donor to Kidney Recipient: A Case Report and Literature Review. North American Journal of Medicine and Science (Dec), 15(1): 13 - 16. doi:10.7156/najms.2022.1501013
- Xiaoyan Wu, Rabheh A. Aziz, Rong Deng, Lin Liu, Shauna Tarsi, Wayne R. Waz. (2021) Complete renal recovery in pediatric patient with C3 glomerulonephritis (C3GN): A case report. Case Rep Nephrol Dial (Oct), 11(2021): 261-269.
- Liang Ding, Brian Murray, John Tomaszewski, Lin Liu. (2021) Identification of Lupus Podocytopathy with Coexistent Glomerular Diseases – A Case Report. ASCP. Virtual, (Oct), (3434963)Poster
Ekrem Maloku, MD., M.M.S.
- Galbraith K, Vasudevaraja V, Serrano J, Shen G, Tran I, Abdallat N, Wen M, Patel S, Movahed-Ezazi M, Faustin A, Spino-Keeton M, Roberts LG, Maloku E, Drexler SA, Liechty BL, Pisapia D, Krasnozhen-Ratush O, Rosenblum M, Shroff S, Boué DR, Davidson C, Mao Q, Suchi M, North P, Hopp A, Segura A, Jarzembowski JA, Parsons L, Johnson MD, Mobley B, Samore W, McGuone D, Gopal PP, Canoll PD, Horbinski C, Fullmer JM, Farooqui MS, Gokden M, Wadhwani NR, Richardson TE, Umphlett M, Tsankova NM, DeWitt JC, Sen C, Placantonakis DG, Pacione D, Wisoff JH, Teresa Hidalgo E, Harter D, William CM, Cordova C, Kurz SC, Barbaro M, Orringer DA, Karajannis MA, Sulman EP, Gardner SL, Zagzag D, Tsirigos A, Allen JC, Golfinos JG, Snuderl M. (2023) Clinical utility of whole-genome DNA methylation profiling as a primary molecular diagnostic assay for central nervous system tumors-A prospective study and guidelines for clinical testing. Neuro-oncology advances (Jan), 5(1): vdad076. doi:10.1093/noajnl/vdad076
- Karajannis MA, Mauguen A, Maloku E, Xu Q, Dunbar EM, Plotkin SR, Yaffee A, Wang S, Roland JT, Sen C, Placantonakis DG, Golfinos JG, Allen JC, Vitanza NA, Chiriboga LA, Schneider RJ, Deng J, Neubert TA, Goldberg JD, Zagzag D, Giancotti FG, Blakeley JO. (2021) Phase 0 Clinical Trial of Everolimus in Patients with Vestibular Schwannoma or Meningioma. Molecular cancer therapeutics (Sep), 20(9): 1584-1591. doi:10.1158/1535-7163.MCT-21-0143
Wilfrido Mojica, MD
- Wilfrido Mojica Donald Yergeau Supriya Mahajan Sadahiv Shenoy. (2023) Coordinated and interdepartmental processing of image-guided core needle biopsies improves recovery of diagnostic material for molecular testing. American Journal of Interventional Radiology (Mar), 7(7) doi:10.25259/AJIR_11_2023
- Yun Wu, Troy Wood, Natesh Parashurama, Supriya Mahajan. (2022) Enabling all four facets of P4 Medicine from the standpoint of the pathology tissue specimen. Advances in Genome Biology and Technology Precision Health. San Diego, California (Sep), (180)Poster
- B Yang, L Liu, F Chen, D Troyer, W Liu, C D'Angelis, R Kozielski, T Wood, A Lzydorczak. (2022) Can tissue specimens also be used for metabolomic profiling without influencing morphological interpretation. College of American Pathologists annual meeting - Advancing Medicine Today and Tomorrow. New Orleans, Louisiana (Sep)Poster
Colin Moore, PhD
- Moore CW, Cotter JR. (2021) Integrating Basic Tissue Histology into A Medical Gross Anatomy Course using a Flipped Classroom Team-Based Design in a Remote Learning Environment. Experimental Biology - American Association of Anatomists Annual Meeting. (Apr)Poster
Hassan Nakhla, MD
Olga Pletnikova, M.D.
- Scholz SW, Moroz BE, Saez-Atienzar S, Chia R, Cahoon EK, Dalgard CL, , , Freedman DM, Pfeiffer RM. (2024) Association of cardiovascular disease management drugs with Lewy body dementia: a case-control study. Brain communications (Jan), 6(1): fcad346. doi:10.1093/braincomms/fcad346
- Reho P, Saez-Atienzar S, Ruffo P, Solaiman S, Shah Z, Chia R, Kaivola K, Traynor BJ, Tilley BS, Gentleman SM, Hodges AK, Aarsland D, Monuki ES, Newell KL, Woltjer R, Albert MS, Dawson TM, Rosenthal LS, Troncoso JC, Pletnikova O, Serrano GE, Beach TG, Easwaran HP, Scholz SW. (2024) Differential methylation analysis in neuropathologically confirmed dementia with Lewy bodies. Communications biology (Jan), 7(1): 35. doi:10.1038/s42003-023-05725-x
- Stein-O'Brien GL, Palaganas R, Meyer EM, Redding-Ochoa J, Pletnikova O, Guo H, Bell WR, Troncoso JC, Huganir RL, Morris M. (2023) Transcriptional Signatures of Hippocampal Tau Pathology in Primary Age-Related Tauopathy and Alzheimer's Disease. medRxiv : the preprint server for health sciences (Sep). doi:10.1101/2023.09.12.23295440
Yousef Soofi, MD
- Ding L, Yang B, Slawinski G, Soofi, Y. (2021) Giant Squamous Cell Carcinoma on The Scalp of A Young African American Male. ASCP 2021 annual meeting, Boston MA.. (Oct)Poster
- Ding L, Bogner, P, Soofi, Y. (2021) Giant cutaneous squamous cell carcinoma of the scalp arising in the setting of folliculitis decalvans. Submitted to BMJ (Oct)
Michal Stachowiak, PhD
- Augustyniak J1,2*,Gaj P3, Kolanowska M3, Jazdzewski K3,4, Bartnik E5, Stepien PP5, Stachowiak, M,K,. (2024) Gene expression patterns of stem and progenitor cells obtained during hiPSCs neural differentiation: linking genes associated with mitochondrial processes to neural development. (Mar)
- 3. Siddhartha Dhimanb*, M. Liputa,d*, Namya Manojb*, Amit Sangwanc, Justin Diehlb , Anna Balceraka, Sneha Sudhakarb, Justyna Augustyniak a,d, Josep M. Jornetc, Ewa K. Stachowiaka, Yongho Baea, Anirban Duttab, Michal K. Stachowiaka.b. (2024) Systems genome – coordinate Gene Activity Networks (GANs), Recurring Coordination Modules (RCM) and genome homeostasis in development of neuronal cells. (Mar)
- T.R. Chaudhuri1, Q. Lin, E.K. Stachowiak , S.R. Rosario , J. A. Spernyak , W. Wee Ma, M.K. Stachowiak , M.K. Greene , Gerard P. Quinn , S.S. McDade, M. Clynes, C. J. Scott and R. M. Straubinger. (2023) Dual-Hit Strategy for Therapeutic Targeting of Pancreatic Cancer in Patient-Derived Xenograft Tumors. CLINICAL CANCER RESEARCH, (Mar) doi:doi: 10.1158/1078-0432.CCR-23-0131.
John Tomaszewski, MD, MASCP
- Hard R., Hipp J., Tangrea M.A. and Tomaszewski J.E. (2021) Applications of Image Science in Pathology and Cell Biology. In: Pathobiology of Human Disease: Linda M. McManus, Richard N. Mitchell, editors. Elsevier, San Diego, 3723-3759.
- Murali LK, Ginley B, Lutnick B, Tomaszewski JE, Sarder P. (2021) Generative modeling for renal microanatomy. (Oct) 1132040:1-10
- Crawford JM, Aguero-Rosenfeld ME, Aifantis I, Cadoff E, Cangiarella JF, Cordon-Cardo A, Cushing M, Firpo-Betancourt A, Fox AS, Fuyura Y, Hacking S, Jhang J, Leonard DGB, Libien J, Loda M, Rao Mendu D, Mulligan MJ, Nasr MR, Pecora ND, Pessin MS, Prystowsky MB, Ramanathan LV, Rauch KR, Riddell S, Roach K, Roth KA, Shroyer KR, Smoller BR, Spitalnik SL, Spitzer ED, Tomaszewski JE, Waltman S, Willis L, Sumer-King Z. (2021) The New York State SARS-COV-2 Testing Consortium: Regional Communication in Response to the COVID-19 Pandemic. Academic Pathology (May), 8 doi:10.1177/23742895211006818
Vincent Tutino, Ph.D
- Waqas M, Monteiro A, Tutino VM, Cappuzzo JM, Vakharia K, Winograd EK, Goulenko V, Gong AD, Snyder KV, Davies JM, Levy EI, Prasad D, Siddiqui AH. (2024) Preradiosurgical Embolization of Arteriovenous Malformations Reduces Target Volume - The Main Determinant for Complete Obliteration. World neurosurgery (Jan), 181: e117-e125.
- Yang K, Musio F, Ma Y, Juchler N, Paetzold JC, Al-Maskari R, Höher L, Li HB, Hamamci IE, Sekuboyina A, Shit S, Huang H, Waldmannstetter D, Kofler F, Navarro F, Menten M, Ezhov I, Rueckert D, Vos I, Ruigrok Y, Velthuis B, Kuijf H, Hämmerli J, Wurster C, Bijlenga P, Westphal L, Bisschop J, Colombo E, Baazaoui H, Makmur A, Hallinan J, Wiestler B, Kirschke JS, Wiest R, Montagnon E, Letourneau-Guillon L, Galdran A, Galati F, Falcetta D, Zuluaga MA, Lin C, Zhao H, Zhang Z, Ra S, Hwang J, Park H, Chen J, Wodzinski M, Müller H, Shi P, Liu W, Ma T, Yalçin C, Hamadache RE, Salvi J, Llado X, Maria Lal-Trehan Estrada U, Abramova V, Giancardo L, Oliver A, Liu J, Huang H, Cui Y, Lin Z, Liu Y, Zhu S, Patel TR, Tutino VM, Orouskhani M, Wang H, Mossa-Basha M, Zhu C, Rokuss MR, Kirchhoff Y, Disch N, Holzschuh J, Isensee F, Maier-Hein K, Sato Y, Hirsch S, Wegener S, Menze B. (2024) TopCoW: Benchmarking Topology-Aware Anatomical Segmentation of the Circle of Willis (CoW) for CTA and MRA. ArXiv (Jan).
- Dmytriw AA, Musmar B, Salim H, Aslan A, Cancelliere NM, McLellan RM, Algin O, Ghozy S, Dibas M, Lay SV, Guenego A, Renieri L, Carnevale JA, Saliou G, Mastorakos P, El Naamani K, Shotar E, Premat K, Möhlenbruch MA, Kral M, Doron O, Chung C, Salem MM, Lylyk I, Foreman PM, Vachhani JA, Shaikh H, Župancic V, Hafeez MU, Catapano JS, Waqas M, Tutino VM, Ibrahim MK, Mohammed MA, Imamoglu C, Bayrak A, Rabinov JD, Ren Y, Schirmer CM, Piano M, Kuhn AL, Michelozzi C, Elens S, Hasan Z, Starke RM, Hassan AE, Ogilvie M, Nguyen A, Jones J, Brinjikji W, Nawka MT, Psychogios MN, Ulfert C, Diestro JDB, Pukenas B, Burkhardt JK, Huynh TJ, Martinez-Gutierrez JC, Essibayi MA, Sheth SA, Spiegel G, Tawk R, Lubicz B, Panni P, Puri AS, Pero G, Nossek E, Raz E, Killer-Oberpfalzer M, Griessenauer CJ, Asadi H, Siddiqui AH, Brook AL, Altschul D, Ducruet AF, Albuquerque FC, Regenhardt RW, Stapleton CJ, Kan P, Kalousek V, Lylyk P, Boddu SR, Knopman J, Aziz-Sultan MA, Tjoumakaris SI, Clarençon F, Limbucci N, Cuellar HH, Jabbour PM, Pereira VM, Patel AB, Adeeb N. (2024) The impact of postoperative aspirin in patients undergoing Woven EndoBridge: a multicenter, institutional, propensity score-matched analysis. Journal of neurointerventional surgery (Jan).