Recent Faculty Publications

We share our research studies with physicians and scientists worldwide through publications in leading academic journals. View a listing of our faculty’s most recent publications.

Jornet JM*, Bae Y*, Handelmann CR, Decker B, Balcerak A, Sangwan A, Miao P, Desai A, Feng L*, Stachowiak EK, Stachowiak MK*. Optogenomic Interfaces: Bridging Biological Networks With the Electronic Digital World. Proceedings of the IEEE. 2019; 107(7)
LaMacchia ZM, Spengler RN, Jaffari M, Abidi AH, Ahmed T, Singh N, Tobinick EL, Ignatowski TA. Perispinal injection of a TNF blocker directed to the brain of rats alleviates the sensory and affective components of chronic constriction injury-induced neuropathic pain. Brain Behav Immun. 2019
Ignatowski TA, Spengler RN. Prescribe exercise to treat infections. Brain Behav Immun. 2019; 77
Wirdatmadja S, Johari P, Desai A, Bae Y, Stachowiak E, Stachowiak M, Jornet JM, Balasubramaniam S. Analysis of Light Propagation on Physiological Properties of Neurons for Nanoscale Optogenetics.. IEEE Transactions on Neural Systems & Rehabilitation Engineering. 2019; 27(2)
Lutnick B, Ginley B, Govind D, McGarry SD, LaViolette PS, Yacoub R, Jain S, Tomaszewski JE, Jen KY, Sarder P. An Integrated Iterative Annotation Technique for Easing Neural Network Training in Medical Image Analysis. Nat Mach Intell. 2019; 1(2)
Majumdar A, Jen KY, Jain S, Tomaszewski JE, Sarder P. Examining Structural Patterns and Causality in Diabetic Nephropathy using inter-Glomerular Distance and Bayesian Graphical Models. Proc SPIE Int Soc Opt Eng. 2019; 10956
Liu SL, Bajpai A, Hawthorne E, Bae Y, Castagnino P, Monslow J, Puré E, Spiller KL, Assoian RK. Cardiovascular protection in females linked to estrogen-dependent inhibition of arterial stiffening and macrophage MMP12. Journal of Clinical Investigation Insights. 2019; 4(1)
Tutino VM, Poppenberg KE, Li L, Shallwani H, Jiang K, Jarvis JN, Sun Y, Snyder KV, Levy EI, Siddiqui AH, Kolega J, Meng H. Biomarkers from circulating neutrophil transcriptomes have potential to detect unruptured intracranial aneurysms. J Transl Med. 2018; 16(1)
Chuye LB, Dimitri A, Desai A, Handelmann C, Bae Y, Johari P, Jornet JM, Stachowiak MK, Stachowiak EK. Brain Organoids – expanding our understanding of human development and disease. In "Human Neural Stem Cells: From Generation to Differentiation and Application” L. Buzanska (Ed). Springer International Publishing AG, Springer Nature. 2018
Maji D, Lu J, Sarder P, Schmieder AH, Cui G, Yang X, Pan D, Lew MD, Achilefu S, Lanza GM. Cellular Trafficking of Sn-2 Phosphatidylcholine Prodrugs Studied with Fluorescence Lifetime Imaging and Super-resolution Microscopy. Precis Nanomed. 2018; 1(2)
Ignatowski TA, Spengler RN. Targeting tumor necrosis factor in the brain relieves neuropathic pain. World Journal of Anesthesiology. 2018; 7(2)
Whitney J, Corredor G, Janowczyk A, Ganesan S, Doyle ST, Tomaszewski J, Feldman M, Gilmore H, Madabhushi A. Quantitative nuclear histomorphometry predicts oncotype DX risk categories for early stage ER+ breast cancer. BMC Cancer. 2018; 18(1)
Wang C, Choi HJ, Kim S, Desai A, Lee N, Kim D, Bae Y, Lee K. Deconvolution Of Subcellular Protrusion Heterogeneity And The Underlying Actin Regulator Dynamics From Live Cell Imaging. Nature Communications. 2018; 9(1688)
Folmsbee J, Doyle ST. Active Deep Learning: Improved Training Efficiency of Convolutional Neural Networks for Tissue Classification in Oral Cavity Cancer. 2018 15th IEEE International Symposium on Biomedical Imaging. 2018
Lewis S, Folmsbee J, Inglis SD, Doyle ST. Building a Hybrid Gross Anatomy Curriculum: Integration of Virtual & Cadaveric Models. The FASEB Journal. 2018; 32(1)
Govind D, Lutnick B, Tomaszewski JE, Sarder P. Automated erythrocyte detection and classification from whole slide images. J Med Imaging (Bellingham). 2018; 5(2)
Spengler RN, Ignatowski TA. An evolving concept: The pathologic level of brain-TNF is a therapeutic target for chronic pain treatment.. BrainImmune.com. 2018
Johnson S, Brandwein M, Doyle ST. Registration parameter optimization for 3d tissue modeling from resected tumors cut into serial H&E slides. Proc. SPIE 10581, Medical Imaging 2018: Digital Pathology, 105810T. 2018
Therrien R, Doyle ST. Role of training data variability on classifier performance and generalizability. Proc. SPIE 10581, Medical Imaging 2018: Digital Pathology; 1058109. 2018; 10581
Moore CW, Rice CL. Rare muscular variations identified in a single cadaveric upper limb: a four-headed biceps brachii and muscular elevator of the latissimus dorsi tendon. Anat Sci Int. 2018; 93(2)