Recent Faculty Publications
Our research has been published in a variety of national and international peer-reviewed journals.
- Biggs BW, Price MN, Lai D, Escobedo J, Fortanel Y, Huang YY, Kim K, Trotter VV, Kuehl JV, Lui LM, Chakraborty R, Deutschbauer AM, Arkin AP. (2024) High-throughput protein characterization by complementation using DNA barcoded fragment libraries. Molecular systems biology (Nov), 20(11): 1207-1229. doi:10.1038/s44320-024-00068-z
- Huang Y, Schomer R, Reyes MJR, Costa K, Parales RE, Whitaker R, Dawson SC. (2024) Metagenome-assembled genomes of freshwater Hyphomicrobium sp. G-191 and Methylophilus sp. enriched from Cedar Swamp, Woods Hole, MA. Microbiology resource announcements (Nov)e0060824.
- Soo N, Farinre O, Chahroudi A, Boliar S, Goswami R. (2024) A gut check: understanding the interplay of the gastrointestinal microbiome and the developing immune system towards the goal of pediatric HIV remission. Retrovirology (Oct), 21(1): 15. doi:10.1186/s12977-024-00648-9
- Huang, Y.Y.; Price, M.N.; Hung, A.; Gal-Oz, O.; Tripathi, S.; Smith, C.W.; Ho, D.; Carion, H.; Deutschbauer, A.M.; Arkin, A.P. (2024) Barcoded overexpression screens in gut Bacteroidales identify genes with roles in carbon utilization and stress resistance. Nature Communications (Aug)(15): 6618.
- Tchalla EYI, Betadpur A, Khalil AY, Bhalla M, Bou Ghanem EN. (2024) Sex-based difference in immune responses and efficacy of the pneumococcal conjugate vaccine. Journal of leukocyte biology (Aug)
- Umthong S, Timilsina U, D'Angelo MR, Salka K, Stavrou S. (2024) MARCH2, a T cell specific factor that restricts HIV-1 infection. PLoS pathogens (Jul), 20(7): e1012330. doi:10.1371/journal.ppat.1012330
- Bou Ghanem EN. (2024) CHIPing away at immunity: the role of clonal hematopoiesis of indeterminate potential in bacterial pneumonia. The Journal of clinical investigation (Jun), 134(11) doi:10.1172/JCI181064
- Simmons SR, Herring SE, Tchalla EYI, Lenhard AP, Bhalla M, Bou Ghanem EN. (2024) Activating A1 adenosine receptor signaling boosts early pulmonary neutrophil recruitment in aged mice in response to Streptococcus pneumoniae infection. Immunity & ageing : I & A (Jun), 21(1): 34. doi:10.1186/s12979-024-00442-3
- Bhalla M, Herring S, Lenhard A, Wheeler JR, Aswad F, Klumpp K, Rebo J, Wang Y, Wilhelmsen K, Fortney K, Bou Ghanem EN. (2024) The prostaglandin D2 antagonist asapiprant ameliorates clinical severity in young hosts infected with invasive Streptococcus pneumoniae. Infection and immunity (May), 92(5): e0052223. doi:10.1128/iai.00522-23
- Cho RJ, Kadowaki K, Seelig D, Glumac DE, Kent LA, Hunter RC, MacIver RH, Peterson GK, Pandey V, Tanahashi K. (2024) To Compare the Effects of a Standard Versus Hydrophilic Polymer Coated Airway Stent in a Porcine Model: A Randomized, Single-Blinded Study. Journal of bronchology & interventional pulmonology (Apr), 31(2): 132-138.
- Ornitz Oliveira Souza R, Yang C, Arrizabalaga G. (2024) Myosin A and F-Actin play a critical role in mitochondrial dynamics and inheritance in Toxoplasma gondii. bioRxiv : the preprint server for biology (Mar). doi:10.1101/2024.03.18.585462
- Timilsina U, Ivey EB, Duffy S, Plianchaisuk A, The Genotype To Phenotype Japan G P-Japan Consortium , Ito J, Sato K, Stavrou S. (2024) SARS-CoV-2 ORF7a Mutation Found in BF.5 and BF.7 Sublineages Impacts Its Functions. International journal of molecular sciences (Feb), 25(4).
- Fihn CA, Lembke HK, Gaulin J, Bouchard P, Villarreal AR, Penningroth MR, Crone KK, Vogt GA, Gilbertsen AJ, Ayotte Y, de Oliveira LC, Serrano-Wu MH, Drouin N, Hung DT, Hunter RC, Carlson EE. (2024) Evaluation of Expanded 2-Aminobenzothiazole Library for Inhibition of Pseudomonas aeruginosa Virulence Phenotypes. bioRxiv : the preprint server for biology (Jan). doi:10.1101/2023.05.02.539119
- Quiñones-Guillén LS, Soto-Gonzalez F, Darden C, Khan-Barozai MY, Tripathi A, Smith JT, Davis J, Misra S, Chaudhuri M. (2024) Unique interactions of the small translocases of the mitochondrial inner membrane (Tims) in Trypanosoma brucei. International Journal of Molecular Sciences (Jan), 25(3): 1415. doi:10.3390/ijms25031415
- Ciganda M, Sotelo-Silveira J, Dubey AP, Pandey P, Smith JT, Shen S, Qu J, Smircich P, Read LK. (2023) Translational control by Trypanosoma brucei DRBD18 contributes to the maintenance of the procyclic state. RNA (New York, N.Y.) (Dec), 29(12): 1881-1895. doi:10.1261/rna.079625.123
- Ciganda M, Sotelo-Silveira J, Pandey P, Smith JT, Shen S, Qu J, Smircich P, Read LK. (2023) Translational control by Trypanosoma brucei DRBD18 contributes to the maintenance of the procyclic state. RNA (Dec), 29(12): 1881-1895. doi:10.1261/rna.079625.123
- Vangay P, Ward T, Lucas S, Beura LK, Sabas D, Abramson M, Till L, Hoops SL, Kashyap P, Hunter RC, Masopust D, Knights D. (2023) Industrialized human gut microbiota increases CD8+ T cells and mucus thickness in humanized mouse gut. Gut microbes (Dec), 15(2): 2266627. doi:10.1080/19490976.2023.2266627
- Martinson JNV, Chacón JM, Smith BA, Villarreal AR, Hunter RC, Harcombe WR. (2023) Mutualism reduces the severity of gene disruptions in predictable ways across microbial communities. The ISME journal (Dec), 17(12): 2270-2278. doi:10.1038/s41396-023-01534-6
- Yang C, Doud EH, Sampson E, Arrizabalaga G. (2023) The protein phosphatase PPKL is a key regulator of daughter parasite development in Toxoplasma gondii. mBio (Dec), 14(6): e0225423. doi:10.1128/mbio.02254-23
- Lê-Bury G, Chen Y, Rhen JM, Grenier JK, Singhal A, Russell DG, Boliar S. (2023) HIV-1 active and latent infections induce disparate chromatin reorganization and transcriptional regulation of mRNAs and lncRNAs in SupT1 cells. mBio (Dec), 14(6): e0261923. doi:10.1128/mbio.02619-23
